Design of a synthetic luminescent probe from a biomolecule binding domain: selective detection of AU-rich mRNA sequences†
Geoffrey D. Shimberg,Sarah L. J. Michel
Chemical Science Pub Date : 11/16/2016 00:00:00 , DOI:10.1039/C6SC04086A
Abstract

We report the design of a luminescent sensor based upon the zinc finger (ZF) protein TIS11d, that allows for the selective time-resolved detection of the UUAUUUAUU sequence of the 3′-untranslated region of messenger RNA. This sensor is composed of the tandem ZF RNA binding domain of TIS11d functionalized with a luminescent Tb3+ complex on one of the ZFs and a sensitizing antenna on the other. This work provides the proof of principle that an RNA binding protein can be re-engineered as an RNA sensor and, more generally, that tunable synthetic luminescent probes for biomolecules can be obtained by modifying biomolecule-binding domains.

Graphical abstract: Design of a synthetic luminescent probe from a biomolecule binding domain: selective detection of AU-rich mRNA sequences