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Design and synthesis of trans-3-aminopyran-2-carboxylic acid (APyC) and α/β-peptides with 9/11-helix†‡
Gangavaram V. M. Sharma,Kodeti Srinivas Reddy,Shaik Jeelani Basha,Kondreddi Ravinder Reddy,Akella V. S. Sarma
Organic & Biomolecular Chemistry Pub Date : 10/19/2011 00:00:00 , DOI:10.1039/C1OB06279D
Abstract

A new β-amino acid, trans-3-aminopyran-2-carboxylic acid (APyC), was designed and synthesized from (R)-glyceraldehyde derivative and used in the synthesis of α/β-peptides in a 1 : 1 alternating pattern with D-Ala. The presence of oxygen atom at the Cβ2-position in APyC was envisaged to provide opportunity for additional interaction. These hybrid peptides have shown the presence of 9/11-helix through extensive NMR and MD studies. The amide protons of D-Ala, in addition to participating in 9-mr H-bonding with CO of succeeding β-residue, were also involved in additional electrostatic interaction with pyran ring oxygen of preceding β-residue, which facilitated further stabilization to the 9/11-mixed helix. The study thus results in a new ‘motif’ for a 9/11-helix, and the first example from a cyclic β-amino acid.

Graphical abstract: Design and synthesis of trans-3-aminopyran-2-carboxylic acid (APyC) and α/β-peptides with 9/11-helix
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