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Rationally-designed fluorescent lysine riboswitch probes†
Pradeep Budhathoki,Lina F. Bernal-Perez,Onofrio Annunziata,Youngha Ryu
Organic & Biomolecular Chemistry Pub Date : 09/04/2012 00:00:00 , DOI:10.1039/C2OB26160J
Abstract

Two fluorescent lysine amide analogs, in which the carboxyl end of lysine was covalently attached to dansyl or NBD groups through an ethylene glycol-based linker, were rationally designed and synthesized. Both probes showed high binding affinity to the lysine riboswitch in vitro and their fluorescence intensities decreased by riboswitch binding.

Graphical abstract: Rationally-designed fluorescent lysine riboswitch probes
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