1. Gene
  2. Sox2 - SRY (sex determining region Y)-box 2 Gene

Sox2 - SRY (sex determining region Y)-box 2 Gene

种属: Mus musculus

同用名: lcc; ysb; Sox-2

基因 ID: 20674 | 基因类型: protein coding

关于 Sox2

功能概要

This intronless gene encodes a member of the SRY-related HMG-box (SOX) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The product of this gene is required for stem-cell maintenance in the central nervous system, and also regulates gene expression in the stomach. Mutations in a similar gene in human have been associated with optic nerve hypoplasia and with syndromic microphthalmia, a severe form of structural eye malformation. This gene lies within an intron of another gene called SOX2 overlapping transcript (Sox2ot). [provided by RefSeq, Sep 2015]

Sox2 基因产物(1)

mRNA Protein Name
NM_011443.4 NP_035573.3 transcription factor SOX-2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA binding IDA
IDA: 通过直接分析推断
8625802 MGI
enables DNA-binding transcription factor activity IDA
IDA: 通过直接分析推断
7628452 MGI
enables DNA-binding transcription factor activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
22344693 MGI
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
21076177 MGI
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
12665572 MGI
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IGI
IGI: 通过遗传相互作用推断
15863505 MGI
enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
25901318 MGI
enables chromatin DNA binding IDA
IDA: 通过直接分析推断
24268575 MGI
enables chromatin binding IDA
IDA: 通过直接分析推断
15988017 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
7590241 MGI
enables sequence-specific DNA binding IDA
IDA: 通过直接分析推断
7628452 MGI
enables transcription cis-regulatory region binding IDA
IDA: 通过直接分析推断
19328208 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of Notch signaling pathway IDA
IDA: 通过直接分析推断
16631155 MGI
acts upstream of Wnt signaling pathway IGI
IGI: 通过遗传相互作用推断
15781477 MGI
acts upstream of or within adenohypophysis development IMP
IMP: 通过突变表型推断
16932809 MGI
acts upstream of or within anatomical structure formation involved in morphogenesis IMP
IMP: 通过突变表型推断
9851841 MGI
acts upstream of or within cell fate commitment IDA
IDA: 通过直接分析推断
18374910 MGI
acts upstream of or within cell fate specification IMP
IMP: 通过突变表型推断
12514105 MGI
acts upstream of or within cellular response to cadmium ion IDA
IDA: 通过直接分析推断
15219627 MGI
acts upstream of or within cerebral cortex development IMP
IMP: 通过突变表型推断
15240551 MGI
acts upstream of or within detection of mechanical stimulus involved in equilibrioception IMP
IMP: 通过突变表型推断
15846349 MGI
acts upstream of or within detection of mechanical stimulus involved in sensory perception of sound IMP
IMP: 通过突变表型推断
15846349 MGI
acts upstream of or within diencephalon morphogenesis IMP
IMP: 通过突变表型推断
15240551 MGI
acts upstream of or within embryonic organ development IMP
IMP: 通过突变表型推断
17522155 MGI
acts upstream of or within epithelial tube branching involved in lung morphogenesis IDA
IDA: 通过直接分析推断
18374910 MGI
acts upstream of or within forebrain neuron differentiation IMP
IMP: 通过突变表型推断
15240551 MGI
involved in gene expression IMP
IMP: 通过突变表型推断
17267691 MGI
acts upstream of or within inner ear morphogenesis IMP
IMP: 通过突变表型推断
15846349 MGI
acts upstream of or within lens induction in camera-type eye IGI
IGI: 通过遗传相互作用推断
17140559 MGI
acts upstream of or within lung alveolus development IDA
IDA: 通过直接分析推断
18374910 MGI
acts upstream of or within male genitalia development IMP
IMP: 通过突变表型推断
16932809 MGI
acts upstream of or within negative regulation of Wnt signaling pathway IGI
IGI: 通过遗传相互作用推断
15781477 MGI
involved in negative regulation of canonical Wnt signaling pathway IDA
IDA: 通过直接分析推断
17875931 MGI
acts upstream of or within negative regulation of cell differentiation IMP
IMP: 通过突变表型推断
17507372 MGI
acts upstream of or within negative regulation of neuron differentiation IDA
IDA: 通过直接分析推断
16631155 MGI
acts upstream of or within negative regulation of osteoblast differentiation IDA
IDA: 通过直接分析推断
15781477 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IGI
IGI: 通过遗传相互作用推断
9649510 MGI
acts upstream of neuroblast proliferation IMP
IMP: 通过突变表型推断
15240551 MGI
acts upstream of neuron differentiation IDA
IDA: 通过直接分析推断
16631155 MGI
acts upstream of neuron differentiation IMP
IMP: 通过突变表型推断
16651659 MGI
acts upstream of or within neuron fate commitment IMP
IMP: 通过突变表型推断
17015430 MGI
involved in neuronal stem cell population maintenance IGI
IGI: 通过遗传相互作用推断
22198669 MGI
acts upstream of or within olfactory placode formation IGI
IGI: 通过遗传相互作用推断
17140559 MGI
acts upstream of osteoblast differentiation IDA
IDA: 通过直接分析推断
15781477 MGI
acts upstream of or within pigment biosynthetic process IMP
IMP: 通过突变表型推断
12036291 MGI
acts upstream of or within positive regulation of Notch signaling pathway IDA
IDA: 通过直接分析推断
16631155 MGI
acts upstream of or within positive regulation of epithelial cell differentiation IDA
IDA: 通过直接分析推断
18374910 MGI
acts upstream of or within positive regulation of neuroblast proliferation IMP
IMP: 通过突变表型推断
15240551 MGI
acts upstream of or within positive regulation of neuron differentiation IMP
IMP: 通过突变表型推断
16651659 MGI
acts upstream of or within positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
7628452 MGI
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
26691508 MGI
acts upstream of or within positive regulation of transcription by RNA polymerase II IGI
IGI: 通过遗传相互作用推断
7590241 MGI
acts upstream of or within positive regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
15988017 MGI
acts upstream of or within regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
12665572 MGI
acts upstream of or within regulation of neurogenesis IGI
IGI: 通过遗传相互作用推断
22513373 MGI
acts upstream of or within regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
19796622 MGI
acts upstream of or within response to retinoic acid IDA
IDA: 通过直接分析推断
18400104 MGI
acts upstream of or within retina morphogenesis in camera-type eye IMP
IMP: 通过突变表型推断
16651659 MGI
acts upstream of or within sensory perception of sound IMP
IMP: 通过突变表型推断
12036291 MGI
acts upstream of or within somatic stem cell population maintenance IMP
IMP: 通过突变表型推断
16767105 MGI
acts upstream of or within stem cell differentiation IDA
IDA: 通过直接分析推断
20123909 MGI
involved in stem cell population maintenance IMP
IMP: 通过突变表型推断
23169531 MGI
acts upstream of or within tongue development IMP
IMP: 通过突变表型推断
17015430 MGI
acts upstream of trophectodermal cell differentiation IMP
IMP: 通过突变表型推断
17507372 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
is active in chromatin IDA
IDA: 通过直接分析推断
23798425 MGI
located in cytoplasm IDA
IDA: 通过直接分析推断
9512512 MGI
located in nucleus IDA
IDA: 通过直接分析推断
9512512 MGI
part of transcription regulator complex IDA
IDA: 通过直接分析推断
17507372 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断
蛋白主名 其他名称

transcription factor SOX-2

SRY-box containing gene 2

Sox2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
Sox2 Q60I23 Chd4 Mus musculus Q6PDQ2 21532573
种属内
Sox2 Q60I23 Chd4 Mus musculus Q6PDQ2 21532573
种属内
Sox2 Q60I23 Chd7 Mus musculus A2AJK6 21532573
种属内
Sox2 Q60I23 Chd7 Mus musculus A2AJK6 21532573
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Sox2 NCBI NCBI:6657