1. Gene
  2. CLCN4 - chloride voltage-gated channel 4 Gene

CLCN4 - chloride voltage-gated channel 4 Gene

中文名称:氯化物电压门控通道 4

种属: Homo sapiens

同用名: CLC4; ClC-4; MRX15; MRX49; ClC-4A; MRXSRC

基因 ID: 1183 | 基因类型: protein coding

关于 CLCN4

Cytogenetic location: Xp22.2 Genomic coordinates (GRCh38): X:10,156,975-10,237,660 (from NCBI)

This gene has 8 transcripts (splice variants), 205 orthologues, 8 paralogues and is associated with 4 phenotypes. Biased expression in brain (RPKM 20.8), heart (RPKM 5.1) and 10 other tissues.

功能概要

电压依赖性氯离子通道基因的 CLCN 家族包含九个成员 (CLCN1-7、Ka 和 Kb) ,它们表现出相当多样的功能特征,同时具有显着的序列同源性。氯离子通道 4 具有一个进化上保守的 CpG 岛,在小鼠和仓鼠中都是保守的。该基因被定位在 APXL (顶端蛋白非洲爪蟾样) 和 OA1 (I 型眼白化病) 附近,它们都位于人类 X 染色体上的 p22.3 带。氯离子通道 4 的生理作用仍然未知,但可能有助于神经元疾病的发病机制。交替剪接导致编码不同蛋白质的两种转录变体。[RefSeq 提供,2012 年 3 月]

The CLCN family of voltage-dependent Chloride Channel genes comprises nine members (CLCN1-7, Ka and Kb) which demonstrate quite diverse functional characteristics while sharing significant sequence homology. Chloride Channel 4 has an evolutionary conserved CpG island and is conserved in both mouse and hamster. This gene is mapped in close proximity to APXL (Apical protein Xenopus laevis-like) and OA1 (Ocular albinism type I), which are both located on the human X chromosome at band p22.3. The physiological role of Chloride Channel 4 remains unknown but may contribute to the pathogenesis of neuronal disorders. Alternate splicing results in two transcript variants that encode different proteins. [provided by RefSeq, Mar 2012]

CLCN4 基因产物(2)

mRNA Protein Name
NM_001256944.2 NP_001243873.1 H(+)/Cl(-) exchange transporter 4 isoform 2
NM_001830.4 NP_001821.2 H(+)/Cl(-) exchange transporter 4 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables antiporter activity IDA
IDA: 通过直接分析推断
28972156 GOA
enables antiporter activity IMP
IMP: 通过突变表型推断
23647072 GOA
enables chloride channel activity IDA
IDA: 通过直接分析推断
10564087 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
32296183 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within chloride transport IDA
IDA: 通过直接分析推断
10564087 GOA
involved in chloride transport IMP
IMP: 通过突变表型推断
23647072 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in endoplasmic reticulum membrane IDA
IDA: 通过直接分析推断
17023393 GOA
located in endosome membrane IDA
IDA: 通过直接分析推断
28972156 GOA
located in lysosomal membrane IDA
IDA: 通过直接分析推断
28972156 GOA
located in recycling endosome IDA
IDA: 通过直接分析推断
28972156 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

CLCN4 蛋白结构

Voltage_CLC

Voltage_CLC: Voltage gated chloride channel (163 - 564)

CBS

CBS: CBS domain (597 - 659)

CBS

CBS: CBS domain (694 - 746)

  • 0
  • 200
  • 400
  • 600
  • 760 a.a.
蛋白主名 其他名称

H(+)/Cl(-) exchange transporter 4

chloride channel 4

CLCN4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
CLCN4 P51793 ABHD5 Homo sapiens Q8WTS1 32296183
种属内
CLCN4 P51793 ABHD5 Homo sapiens Q8WTS1 32296183
种属内
CLCN4 P51793 ABHD5 Homo sapiens Q8WTS1 32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Raynaud-Claes Syndrome

Mrx49

MRXSRC

Mental Retardation, X-Linked 49

Mrx15

Clcn4-Related X-Linked Intellectual Disability Syndrome

Mental Retardation, X-Linked 15

X-Linked Mental Retardation 15

X-Linked Mental Retardation 49

Mental Retardation, X-Linked-49

Non-Syndromic X-Linked Intellectual Disability

X-Linked Non-Syndromic Intellectual Disability

Non-Specific X-Linked Mental Retardation

X-Linked Non-Specific Intellectual Disability

Ocular Albinism

Albinism, Ocular

Oa

Xloa

Albinism Ocular

Acute Dacryocystitis

Dacryocystitis - Acute

Intestinal Impaction
Dent Disease 1

Dent Disease

Dent'S Disease

Dent Disease 2

Dent Disease Type 1

DENT1

Urolithiasis, Hypercalciuric, X-Linked

Nephrolithiasis 2

Nphl2

Dent Syndrome

Dents Disease

Low-Molecular-Weight Proteinuria With Hypercalciuria And Nephrocalcinosis

Renal Fanconi Syndrome With Nephrocalcinosis And Renal Stones

X-Linked Recessive Hypercalciuric Hypophosphatemic Rickets

X-Linked Recessive Nephrolithiasis

Fanconi Syndrome, Renal, With Nephrocalcinosis And Renal Stones

Nephrolithiasis, Hypercalciuric, X-Linked

Nephrolithiasis-Hypercalciuria X-Linked Recessive

Nephrolithiasis, X-Linked Recessive

Dent Disease, Type 1

Acute Inflammation Of Lacrimal Passage
Dacryocystitis

Nasolacrimal Sac Infection

Neurodevelopmental Disorder With Involuntary Movements

NEDIM

Myotonia Congenita

Congenital Myotonia, Autosomal Dominant Form

Congenital Myotonia

Thomsen And Becker Disease

Thomsen Disease

Thomsen'S Disease

Generalized Myotonia Of Thomsen

Congenital Myotonic Muscular Dystrophy

Myotonia Congenita Nos

N Syndrome

NSX

Intellectual Disability, Malformations, Chromosome Breakage, And Development Of T-Cell Leukemia

Renal Tubular Transport Disease

Renal Tubular Transport, Inborn Errors

Inborn Renal Tubular Transport Disorder

Hypophosphatemic Rickets, X-Linked Recessive

Hypophosphatemic Rickets

X-Linked Recessive Hypophosphatemic Rickets

XLRHR

Hypophosphatemic Rickets Disorders

Rickets Hypophosphatemic

Rickets, Hypophosphatemic, X-Linked Recessive

Familial Hypophosphatemic Rickets

West Syndrome

Infantile Spasms

Infantile Spasms Syndrome

Infantile Spasm

X-Linked Infantile Spasm Syndrome

X-Linked Infantile Spasms

Epileptic Encephalopathy, Early Infantile, 1

Is

Tonic Spasms With Clustering, Arrest Of Psychomotor Development And Hypsarrhythmia On Eeg

West'S Syndrome

Spasms, Infantile

Is -[Infantile Spasm]

Salaam Spasm

Salaam Tic

Early Infantile Epileptic Encephalopathy

Early Infantile Epileptic Encephalopathy With Burst-Suppression

Early Infantile Epileptic Encephalopathy With Suppression Bursts

Eiee

Early Infantile Epileptic Encephalopathy With Suppression-Bursts

Ohtahara Syndrome

Encephalopathy, Epileptic, Early Infantile

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus CLCN4 MGD MGI:104571
Bos taurus CLCN4 VGNC VGNC:27398
Canis familiaris CLCN4 VGNC VGNC:39304
Felis catus CLCN4 VGNC VGNC:60926
Macaca mulatta CLCN4 VGNC VGNC:71237
Rattus norvegicus CLCN4 RGD RGD:708381